Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907248.1_cds_XP_016457387.1_51119
CDS Infomation

[gene=LOC107781228] [db_xref=GeneID:107781228] [protein=receptor-like protein kinase HERK 1] [protein_id=XP_016457387.1] [location=join(62187..62370,62454..62522,62674..62742,62819..62881,62967..63289,63406..63906)] [gbkey=CDS]
Sequence

ATGATGTTGAAGCGGTACCAGTTGGAACAATTACAAAAGGCAACTAATAATTTCAGTGAA
GATTGTCTGGTTGGTTCTGGTGCATTTGGAAATGTCTATAAAGGAACATTTGATGGGGAG
GAAGCACTAGCTATAAAGAAGGCACATACTGAATCATACACCAGCACTGAAGAGTTTGAA
AATGAGATCAGGTTGCTCTCAAAAGTGAAGCACAGGAACCTCGTTAGTTTGGTGGGGTTC
TGCCAAGAAGCTGGGCCAAAGGGAGCAAAAATTCTGGTGTATGAGTATGTTCCAAATGGT
TCTCTGCTAGACTACATCATGGGGAGGGGAGGAAGGGGCTTAACATGGAGGCATAGAGTG
ACGATAGCCATTGGAGCTGCTAAAGGTATAGCTCATCTGCATGAAGGAAGCAAACCAAGT
ATAATTCATCGGGACATAAAACCGAGCAACATCTTGGTAGGAGAGAACTTTGAGGCCAAG
GTCTCAGATTTTGGGCTTGTGAAATCGGGTCCTAGTGGGGATCAGTCACATGTTAGCAGT
CAGATAAAGGGGACACCAGGGTACCTTGACCCTGCCTACTGTTCATCTCTCCATTTGACT
TCATTCACCGACGTATACAGCTATGGTGTTATATTACTGCAGCTTGTTGCTGCTAGACCT
GTAGTCGAGAACAGCAGAGGTCATCCTAATTTTCACATTATTGATTGGGCAAGACCTAGC
TTGGAACGAGGAAGCATTGATGAAATAATAGATGCTAATCTCTTGATGGAACATTGCAAC
ATGGAAATGATGTTGAAAATGGGACAACTTGGTCTGAAATGTGTGGTCAAAGTCCCTAGA
GAAAGGCCTAAAATGACTCAAGTATGGCAAGAACTGGAGGCTGCCCTATTTTCTGCAGAA
ACTATCATATATAAACAACCTTCAAATGGTTCCTTACAATTAGCAAGCTTGTCAAGCGGA
TCAATGGGTCGTAGAAACCATCAACCGAAACAACTTGATGATTCTCAAAGCTCAGTTAGC
ATAGATGGCATTAGATTGCAGAGGTTTCACTTGGACATAGATCGCCTATCCTTTGGTAGT
GCAAATTTGAGGTGCTTAGATGCCTATAGTATAAGCATTGAAGACGACTCATACGATCTG
ACAGGAACTTCCGAGGAAACAACCACGAGTGGAAACGAAGAGTTTAGGCTAACATACAAT
ATCAGTTAA

Peptide Sequence

PEP ID

XP_016457387.1
PEP Infomation

PREDICTED: receptor-like protein kinase HERK 1 [Nicotiana tabacum]
Sequence

MMLKRYQLEQLQKATNNFSEDCLVGSGAFGNVYKGTFDGEEALAIKKAHTESYTSTEEFE
NEIRLLSKVKHRNLVSLVGFCQEAGPKGAKILVYEYVPNGSLLDYIMGRGGRGLTWRHRV
TIAIGAAKGIAHLHEGSKPSIIHRDIKPSNILVGENFEAKVSDFGLVKSGPSGDQSHVSS
QIKGTPGYLDPAYCSSLHLTSFTDVYSYGVILLQLVAARPVVENSRGHPNFHIIDWARPS
LERGSIDEIIDANLLMEHCNMEMMLKMGQLGLKCVVKVPRERPKMTQVWQELEAALFSAE
TIIYKQPSNGSLQLASLSSGSMGRRNHQPKQLDDSQSSVSIDGIRLQRFHLDIDRLSFGS
ANLRCLDAYSISIEDDSYDLTGTSEETTTSGNEEFRLTYNIS

Transcript Sequence

Gene sequence data has not been registered.